EnhancerDB
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  3. rs5778702[chr1:171410993]
Enhancers that have rs5778702[chr1:171410993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs5778702[chr1:171410993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171410729 171411185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349738
chr1 171410991 171411006 FOXP1 JASPAR yes 33081604
chr1 171410992 171411007 FOXP1 JASPAR yes 33081605
chr1 171410993 171411008 FOXP1 JASPAR yes 33081606
chr1 171410993 171411014 IRF1 JASPAR yes 33081607
Genes associated with rs5778702[chr1:171410993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More