EnhancerDB
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  3. rs5778765[chr1:173394278]
Enhancers that have rs5778765[chr1:173394278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs5778765[chr1:173394278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173393065 173394359 TEF1 GTRD no Bone (Osteoblast) 21351389
chr1 173393950 173394290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351410
chr1 173394128 173394289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351411
chr1 173394158 173395561 ZNF274 GTRD no Bone Marrow (K562) 21351412
chr1 173394277 173394288 FOXH1 JASPAR yes 33198830
chr1 173394278 173394284 ZNF354C JASPAR yes 33198831
Genes associated with rs5778765[chr1:173394278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More