EnhancerDB
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  3. rs577978060[chr5:172203535]
Enhancers that have rs577978060[chr5:172203535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172203413 172203849 vista50167
VISTA
Transcript factors that have rs577978060[chr5:172203535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172203534 172203543 SOX9 JASPAR yes 67825039
chr5 172203534 172203543 SOX9 JASPAR yes 70763023
Genes associated with rs577978060[chr5:172203535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More