EnhancerDB
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  3. rs577980006[chr1:172320120]
Enhancers that have rs577980006[chr1:172320120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577980006[chr1:172320120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172320110 172320123 POU2F2 JASPAR yes 33124533
chr1 172320110 172320124 POU1F1 JASPAR yes 33124534
chr1 172320111 172320123 POU3F1 JASPAR yes 33124535
chr1 172320111 172320123 POU3F2 JASPAR yes 33124536
chr1 172320111 172320124 POU3F3 JASPAR yes 33124537
chr1 172320113 172320120 POU2F1 TRANSFAC yes 33124539
chr1 172320113 172320120 POU2F2C TRANSFAC yes 33124540
chr1 172320113 172320120 POU2F2 TRANSFAC yes 33124541
chr1 172320113 172320122 POU5F1B JASPAR yes 33124542
chr1 172320119 172320125 ZNF354C JASPAR yes 33124543
Genes associated with rs577980006[chr1:172320120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More