EnhancerDB
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  3. rs577987976[chr12:52522650]
Enhancers that have rs577987976[chr12:52522650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs577987976[chr12:52522650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52520293 52522962 AR GTRD no Prostate (PC-3) 21546248
chr12 52521045 52523202 P63 GTRD no Skin (Keratinocyte) 21546258
chr12 52521596 52523194 ZNF143 GTRD no Epithelial (MCF-7) 21546269
chr12 52521781 52522884 ZNF143 GTRD no Epithelial (MCF-7) 21546270
chr12 52522269 52523433 P63 GTRD no Skin (Keratinocyte) 21546274
chr12 52522630 52522650 RREB1 JASPAR yes 120919891
chr12 52522632 52522652 RREB1 JASPAR yes 120919892
chr12 52522633 52522653 RREB1 JASPAR yes 120919894
chr12 52522636 52522656 RREB1 JASPAR yes 120919895
chr12 52522637 52522657 RREB1 JASPAR yes 120919897
chr12 52522640 52522660 RREB1 JASPAR yes 120919898
chr12 52522641 52522653 FOXI1 JASPAR yes 120919899
chr12 52522641 52522661 RREB1 JASPAR yes 120919900
chr12 52522645 52522657 FOXI1 JASPAR yes 120919901
chr12 52522645 52522665 RREB1 JASPAR yes 120919902
chr12 52522649 52522661 FOXI1 JASPAR yes 120919903
chr12 52522649 52522669 RREB1 JASPAR yes 120919904
Genes associated with rs577987976[chr12:52522650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More