EnhancerDB
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  3. rs5780225[chr1:204262031]
Enhancers that have rs5780225[chr1:204262031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs5780225[chr1:204262031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
Genes associated with rs5780225[chr1:204262031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 204187979 204346793 - PLEKHA6 ENSG00000143850.8 204346793 0 Esophagus 0.000407297 1751
chr1 204187979 204346793 - PLEKHA6 ENSG00000143850.8 204346793 0 Spleen 5.50845e-10 1751
chr1 204187979 204346793 - PLEKHA6 ENSG00000143850.8 204346793 0 Lung 9.3401e-29 1751
chr1 204187979 204346793 - PLEKHA6 ENSG00000143850.8 204346793 0 Adrenal 0.00102617 1751