EnhancerDB
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  3. rs578054354[chr11:12825605]
Enhancers that have rs578054354[chr11:12825605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs578054354[chr11:12825605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12825603 12825614 HOXA10 JASPAR yes 37479868
chr11 12825603 12825617 GATA2 JASPAR yes 37479869
Genes associated with rs578054354[chr11:12825605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More