EnhancerDB
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  3. rs57809128[chr6:11212525]
Enhancers that have rs57809128[chr6:11212525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs57809128[chr6:11212525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11212513 11212528 PRDM1 JASPAR yes 99864914
chr6 11212513 11212528 STAT2 JASPAR yes 99864915
chr6 11212515 11212536 IRF1 JASPAR yes 99864916
chr6 11212517 11212532 IRF9 JASPAR yes 99864917
chr6 11212518 11212532 IRF7 JASPAR yes 99864919
chr6 11212518 11212532 IRF8 JASPAR yes 99864920
chr6 11212519 11212534 PRDM1 JASPAR yes 99864921
chr6 11212524 11212535 NFKB1 JASPAR yes 99864922
Genes associated with rs57809128[chr6:11212525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More