EnhancerDB
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  3. rs578139431[chr2:75070054]
Enhancers that have rs578139431[chr2:75070054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75065325 75080614 enh5655
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs578139431[chr2:75070054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75070046 75070065 RFX2 JASPAR yes 75108453
chr2 75070048 75070063 RFX5 JASPAR yes 75108454
chr2 75070054 75070064 HMBOX1 JASPAR yes 75108455
Genes associated with rs578139431[chr2:75070054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More