EnhancerDB
  1. Home
  2. SNP
  3. rs578239162[chr1:8123277]
Enhancers that have rs578239162[chr1:8123277]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8113937 8146415 enh11460
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs578239162[chr1:8123277]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8123256 8123277 IRF1 JASPAR yes 26506970
chr1 8123257 8123278 IRF1 JASPAR yes 26506972
chr1 8123258 8123279 IRF1 JASPAR yes 26506974
chr1 8123260 8123281 IRF1 JASPAR yes 26506977
chr1 8123264 8123279 PRDM1 JASPAR yes 26506979
chr1 8123264 8123279 STAT2 JASPAR yes 26506980
Genes associated with rs578239162[chr1:8123277], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More