EnhancerDB
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  3. rs578242003[chr19:10984536]
Enhancers that have rs578242003[chr19:10984536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs578242003[chr19:10984536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 21849085
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 108384154
chr19 10983385 10984913 ZNF143 GTRD no Epithelial (MCF-7) 108384155
chr19 10983742 10984673 ZNF143 GTRD no Epithelial (MCF-7) 21849087
chr19 10983742 10984673 ZNF143 GTRD no Epithelial (MCF-7) 108384157
chr19 10983768 10985337 ZNF143 GTRD no Epithelial (MCF-7) 21849089
chr19 10983768 10985337 ZNF143 GTRD no Epithelial (MCF-7) 108384159
chr19 10983774 10984874 TCF7L2 GTRD no Colon (HCT116) 21849090
chr19 10983774 10984874 TCF7L2 GTRD no Colon (HCT116) 108384160
Genes associated with rs578242003[chr19:10984536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More