EnhancerDB
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  3. rs578247320[chr19:4370918]
Enhancers that have rs578247320[chr19:4370918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs578247320[chr19:4370918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 21840839
chr19 4367290 4371194 ZNF274 GTRD no Blood (GM12878) 108370902
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 21840840
chr19 4367394 4372021 ZNF274 GTRD no Blood (GM12878) 108370903
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 21840841
chr19 4367487 4371346 ZNF274 GTRD no Blood (GM12878) 108370904
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 21840844
chr19 4367981 4371413 ZNF274 GTRD no Blood (GM12878) 108370907
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 21840846
chr19 4368844 4371208 TCF7L2 GTRD no Colon (HCT116) 108370909
chr19 4368905 4371014 TCF7L2 GTRD no Colon (HCT116) 21840851
chr19 4368905 4371014 TCF7L2 GTRD no Colon (HCT116) 108370914
chr19 4368907 4371153 ZNF274 GTRD no Blood (GM12878) 21840852
chr19 4368907 4371153 ZNF274 GTRD no Blood (GM12878) 108370915
chr19 4368922 4371199 TCF7L2 GTRD no Colon (HCT116) 21840857
chr19 4368922 4371199 TCF7L2 GTRD no Colon (HCT116) 108370920
chr19 4368929 4371542 ZNF274 GTRD no Blood (GM12878) 21840859
chr19 4368929 4371542 ZNF274 GTRD no Blood (GM12878) 108370922
chr19 4368949 4371589 ZNF274 GTRD no Blood (GM12878) 21840865
chr19 4368949 4371589 ZNF274 GTRD no Blood (GM12878) 108370928
chr19 4368956 4370933 ZNF143 GTRD no Epithelial (MCF-7) 21840869
chr19 4368956 4370933 ZNF143 GTRD no Epithelial (MCF-7) 108370932
chr19 4368985 4371316 TCF7L2 GTRD no Colon (HCT116) 21840875
chr19 4368985 4371316 TCF7L2 GTRD no Colon (HCT116) 108370938
chr19 4369014 4371171 ZNF143 GTRD no Epithelial (MCF-7) 21840888
chr19 4369014 4371171 ZNF143 GTRD no Epithelial (MCF-7) 108370951
chr19 4369047 4371172 ZNF143 GTRD no Epithelial (MCF-7) 21840897
chr19 4369047 4371172 ZNF143 GTRD no Epithelial (MCF-7) 108370960
chr19 4369409 4371207 ZNF143 GTRD no Epithelial (MCF-7) 21840933
chr19 4369409 4371207 ZNF143 GTRD no Epithelial (MCF-7) 108370998
chr19 4370903 4370918 RUNX2 JASPAR yes 112169225
chr19 4370918 4370937 REST JASPAR yes 112169228
Genes associated with rs578247320[chr19:4370918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More