EnhancerDB
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  3. rs579742[chr6:42292619]
Enhancers that have rs579742[chr6:42292619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs579742[chr6:42292619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42292614 42292635 IRF1 JASPAR yes 101708994
chr6 42292616 42292631 IRF9 JASPAR yes 101708995
chr6 42292617 42292631 IRF7 JASPAR yes 101708996
chr6 42292618 42292632 STAT1 JASPAR yes 101708997
chr6 42292618 42292633 PRDM1 JASPAR yes 101708998
chr6 42292618 42292633 STAT2 JASPAR yes 101708999
chr6 42292618 42292636 IRF2 JASPAR yes 101709000
chr6 42292619 42292631 IRF1 JASPAR yes 101709001
Genes associated with rs579742[chr6:42292619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More