EnhancerDB
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  3. rs5797982[chr12:46831981]
Enhancers that have rs5797982[chr12:46831981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5797982[chr12:46831981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46830845 46832062 TCF7L2 GTRD no Colon (HCT116) 21541620
chr12 46831304 46832763 ZBTB33 GTRD no Brain (SK-N-SH) 108027317
chr12 46831368 46831990 TCF7L2 GTRD no Colon (HCT116) 21541628
chr12 46831385 46832043 ZNF143 GTRD no Epithelial (MCF-7) 21541629
chr12 46831966 46831981 SCRT1 JASPAR yes 120620433
chr12 46831968 46831981 SCRT2 JASPAR yes 120620434
Genes associated with rs5797982[chr12:46831981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More