EnhancerDB
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  3. rs5797986[chr12:46852609]
Enhancers that have rs5797986[chr12:46852609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5797986[chr12:46852609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46852602 46852612 POU6F2 JASPAR yes 120623960
chr12 46852603 46852613 EVX2 JASPAR yes 120623961
chr12 46852603 46852613 GSX1 JASPAR yes 120623962
chr12 46852603 46852613 HOXA2 JASPAR yes 120623963
chr12 46852603 46852613 NOTO JASPAR yes 120623964
chr12 46852604 46852618 POU1F1 JASPAR yes 120623965
chr12 46852605 46852617 POU3F1 JASPAR yes 120623966
chr12 46852605 46852617 POU3F2 JASPAR yes 120623967
chr12 46852605 46852618 POU3F3 JASPAR yes 120623968
chr12 46852606 46852610 YY1 TRANSFAC yes 120623969
chr12 46852606 46852618 POU2F1 JASPAR yes 120623970
chr12 46852607 46852616 POU3F4 JASPAR yes 120623971
chr12 46852607 46852616 POU5F1B JASPAR yes 120623972
Genes associated with rs5797986[chr12:46852609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More