EnhancerDB
  1. Home
  2. SNP
  3. rs57999206[chr1:171400938]
Enhancers that have rs57999206[chr1:171400938]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs57999206[chr1:171400938]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171400350 171400966 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349647
chr1 171400931 171400943 YY1 JASPAR yes 33080022
chr1 171400934 171400940 YY1 JASPAR yes 33080023
Genes associated with rs57999206[chr1:171400938], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More