EnhancerDB
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  3. rs5820836[chr17:48975969]
Enhancers that have rs5820836[chr17:48975969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5820836[chr17:48975969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48975718 48976273 ZNF274 GTRD no Liver (HepG2) 21770578
chr17 48975905 48976151 ZNF274 GTRD no Liver (HepG2) 21770579
chr17 48975918 48976166 ZNF274 GTRD no Bone Marrow (K562) 21770580
chr17 48975966 48975981 FOXP1 JASPAR yes 54730702
chr17 48975968 48975974 TBP TRANSFAC yes 54730703
chr17 48975969 48975984 PRDM1 JASPAR yes 54730704
chr17 48975969 48975984 STAT2 JASPAR yes 54730705
chr17 48975969 48976214 ZNF274 GTRD no Cervix (HeLa-S3) 21770581
Genes associated with rs5820836[chr17:48975969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More