EnhancerDB
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  3. rs5821473[chr17:65477893]
Enhancers that have rs5821473[chr17:65477893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65477756 65478333 vista25646
VISTA
Transcript factors that have rs5821473[chr17:65477893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782279
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285952
chr17 65477888 65477903 MEF2C JASPAR yes 21279966
chr17 65477888 65477903 MEF2C JASPAR yes 55509841
chr17 65477890 65477905 FOXP1 JASPAR yes 21279967
chr17 65477890 65477905 FOXP1 JASPAR yes 55509842
chr17 65477891 65477906 FOXP1 JASPAR yes 21279968
chr17 65477891 65477906 FOXP1 JASPAR yes 55509843
chr17 65477891 65477912 IRF1 JASPAR yes 21279969
chr17 65477891 65477912 IRF1 JASPAR yes 55509844
chr17 65477892 65477898 TBP TRANSFAC yes 21279970
chr17 65477892 65477898 TBP TRANSFAC yes 55509845
chr17 65477892 65477907 FOXP1 JASPAR yes 21279971
chr17 65477892 65477907 FOXP1 JASPAR yes 55509846
chr17 65477893 65477908 FOXP1 JASPAR yes 21279972
chr17 65477893 65477908 FOXP1 JASPAR yes 55509847
Genes associated with rs5821473[chr17:65477893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More