EnhancerDB
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  3. rs5822538[chr17:80514318]
Enhancers that have rs5822538[chr17:80514318]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5822538[chr17:80514318]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80514313 80514328 MEF2C JASPAR yes 56374520
chr17 80514316 80514331 FOXP1 JASPAR yes 56374521
chr17 80514316 80514337 IRF1 JASPAR yes 56374522
chr17 80514317 80514323 TBP TRANSFAC yes 56374523
chr17 80514317 80514332 FOXP1 JASPAR yes 56374524
Genes associated with rs5822538[chr17:80514318], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More