EnhancerDB
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  3. rs58240955[chr1:19781096]
Enhancers that have rs58240955[chr1:19781096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58240955[chr1:19781096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19781082 19781102 ESR1 JASPAR yes 27192613
chr1 19781087 19781102 ESR2 JASPAR yes 27192614
chr1 19781087 19781107 ESR1 JASPAR yes 27192615
chr1 19781096 19781111 TFAP2A JASPAR yes 27192616
Genes associated with rs58240955[chr1:19781096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More