EnhancerDB
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  3. rs58242477[chr2:232531474]
Enhancers that have rs58242477[chr2:232531474]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232527256 232532109 vista1014
VISTA
Transcript factors that have rs58242477[chr2:232531474]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 107690841
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 108435726
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 108435727
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 107690842
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 108435728
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 108435729
chr2 232531038 232531498 TFAP2C UCSC Txn Factor no Conserved 107690843
chr2 232531038 232531498 TFAP2C UCSC Txn Factor no Conserved 108435730
chr2 232531055 232531494 MAZ UCSC Txn Factor no Conserved 107690844
chr2 232531055 232531494 MAZ UCSC Txn Factor no Conserved 108435731
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 107690845
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 108435732
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 108435733
chr2 232531466 232531475 ZEB1 JASPAR yes 68301521
chr2 232531466 232531475 ZEB1 JASPAR yes 81733792
chr2 232531467 232531477 TCF4 JASPAR yes 68301522
chr2 232531467 232531477 TCF4 JASPAR yes 81733793
chr2 232531469 232531474 USF2 TRANSFAC yes 68301523
chr2 232531469 232531474 USF2 TRANSFAC yes 81733794
Genes associated with rs58242477[chr2:232531474], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More