EnhancerDB
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  3. rs5830046[chr2:27929616]
Enhancers that have rs5830046[chr2:27929616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs5830046[chr2:27929616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27929595 27929616 REST JASPAR yes 72583344
chr2 27929614 27929629 FOXP1 JASPAR yes 72583346
chr2 27929615 27929630 FOXP1 JASPAR yes 72583347
chr2 27929616 27929631 FOXP1 JASPAR yes 72583348
Genes associated with rs5830046[chr2:27929616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More