EnhancerDB
  1. Home
  2. SNP
  3. rs5839738[chr2:240195709]
Enhancers that have rs5839738[chr2:240195709]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5839738[chr2:240195709]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240195699 240195709 ID4 JASPAR yes 82224515
chr2 240195699 240195709 TCF3 JASPAR yes 82224516
chr2 240195699 240195709 TCF4 JASPAR yes 82224517
chr2 240195700 240195709 SNAI2 JASPAR yes 82224518
Genes associated with rs5839738[chr2:240195709], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More