EnhancerDB
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  3. rs58398748[chr12:125221123]
Enhancers that have rs58398748[chr12:125221123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58398748[chr12:125221123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125220180 125221384 ZNF274 GTRD no Cervix (HeLa-S3) 21582471
chr12 125220249 125221157 ZNF143 GTRD no Epithelial (MCF-7) 21582478
chr12 125220482 125221133 ZNF274 GTRD no Bone Marrow (K562) 21582484
chr12 125220482 125221151 ZNF274 GTRD no Bone Marrow (K562) 21582485
chr12 125220669 125221230 ZNF143 GTRD no Epithelial (MCF-7) 21582486
chr12 125220675 125221526 ZNF274 GTRD no Bone Marrow (K562) 21582487
chr12 125220727 125221279 ZNF274 GTRD no Cervix (HeLa-S3) 21582488
chr12 125220735 125221388 ZNF274 GTRD no Cervix (HeLa-S3) 21582489
chr12 125220806 125221490 ZNF143 GTRD no Epithelial (MCF-7) 21582490
chr12 125220863 125221392 ZNF143 GTRD no Epithelial (MCF-7) 21582491
chr12 125220943 125221237 TCF7L2 GTRD no Colon (HCT116) 21582492
chr12 125220971 125221413 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582493
chr12 125220994 125221358 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582494
chr12 125221000 125221409 ZNF274 GTRD no Liver (HepG2) 21582495
chr12 125221115 125221126 NRF1 JASPAR yes 124415517
chr12 125221116 125221127 NRF1 JASPAR yes 124415518
chr12 125221117 125221137 RREB1 JASPAR yes 124415519
chr12 125221123 125221135 ZBTB7A JASPAR yes 124415520
Genes associated with rs58398748[chr12:125221123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More