EnhancerDB
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  3. rs586057[chr1:39858794]
Enhancers that have rs586057[chr1:39858794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs586057[chr1:39858794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39858791 39858805 GATA2 JASPAR yes 28272647
chr1 39858794 39858805 HOXA10 JASPAR yes 28272648
Genes associated with rs586057[chr1:39858794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More