EnhancerDB
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  3. rs58664572[chr5:172277675]
Enhancers that have rs58664572[chr5:172277675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58664572[chr5:172277675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172277664 172277676 NHLH1 JASPAR yes 67834608
chr5 172277665 172277675 MSC JASPAR yes 67834609
chr5 172277665 172277675 NHLH1 JASPAR yes 67834610
Genes associated with rs58664572[chr5:172277675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 171636644 171711075 - UBTD2 ENSG00000168246.5 171711075 566600 Esophagus 0.267172 5981