EnhancerDB
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  3. rs58712642[chr12:125211509]
Enhancers that have rs58712642[chr12:125211509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58712642[chr12:125211509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125211378 125211771 TCF7L2 GTRD no Colon (HCT116) 21582356
chr12 125211457 125211713 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582357
chr12 125211490 125211510 RREB1 JASPAR yes 124414143
chr12 125211492 125211512 RREB1 JASPAR yes 124414144
chr12 125211496 125211516 RREB1 JASPAR yes 124414145
chr12 125211497 125211517 RREB1 JASPAR yes 124414147
chr12 125211498 125211518 RREB1 JASPAR yes 124414148
chr12 125211499 125211509 ZNF740 JASPAR yes 124414149
chr12 125211502 125211523 ZNF263 JASPAR yes 124414150
chr12 125211506 125211527 ZNF263 JASPAR yes 124414151
chr12 125211507 125211517 SP1 JASPAR yes 124414152
Genes associated with rs58712642[chr12:125211509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More