EnhancerDB
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  3. rs58719486[chr1:9226374]
Enhancers that have rs58719486[chr1:9226374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs58719486[chr1:9226374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802008
chr1 9224562 9226488 ZNF143 GTRD no Epithelial (MCF-7) 107802009
chr1 9226369 9226379 HOXA13 JASPAR yes 26624565
chr1 9226369 9226379 HOXB13 JASPAR yes 26624566
chr1 9226369 9226379 HOXC10 JASPAR yes 26624567
chr1 9226369 9226379 HOXD11 JASPAR yes 26624568
chr1 9226369 9226379 HOXD13 JASPAR yes 26624569
chr1 9226369 9226380 HOXA10 JASPAR yes 26624570
chr1 9226369 9226380 HOXC11 JASPAR yes 26624571
chr1 9226369 9226380 HOXC12 JASPAR yes 26624572
chr1 9226369 9226380 HOXC13 JASPAR yes 26624573
chr1 9226369 9226380 HOXD12 JASPAR yes 26624574
chr1 9226370 9226379 CDX1 JASPAR yes 26624575
chr1 9226370 9226381 CDX2 JASPAR yes 26624576
Genes associated with rs58719486[chr1:9226374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More