EnhancerDB
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  3. rs5875272[chr6:30741366]
Enhancers that have rs5875272[chr6:30741366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5875272[chr6:30741366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30741363 30741378 FOXP1 JASPAR yes 101047329
chr6 30741364 30741379 FOXP1 JASPAR yes 101047330
chr6 30741365 30741380 FOXP1 JASPAR yes 101047331
chr6 30741365 30741386 IRF1 JASPAR yes 101047332
chr6 30741366 30741381 FOXP1 JASPAR yes 101047333
Genes associated with rs5875272[chr6:30741366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More