EnhancerDB
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  3. rs58909367[chr17:2752881]
Enhancers that have rs58909367[chr17:2752881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs58909367[chr17:2752881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2752872 2752885 SMAD2 JASPAR yes 52777036
chr17 2752874 2752885 E2F4 JASPAR yes 52777037
chr17 2752874 2752885 E2F6 JASPAR yes 52777038
chr17 2752875 2752886 E2F1 JASPAR yes 52777039
chr17 2752877 2752892 TFAP2A JASPAR yes 52777040
chr17 2752877 2752892 TFAP2C JASPAR yes 52777041
chr17 2752878 2752885 SP1 TRANSFAC yes 52777042
chr17 2752879 2752884 SP1 TRANSFAC yes 52777043
chr17 2752879 2752885 SP1 TRANSFAC yes 52777044
chr17 2752880 2752891 TFAP2A JASPAR yes 52777045
chr17 2752880 2752891 TFAP2B JASPAR yes 52777046
chr17 2752880 2752891 TFAP2C JASPAR yes 52777047
chr17 2752880 2752892 TFAP2A JASPAR yes 52777048
chr17 2752881 2752890 TFAP2A JASPAR yes 52777049
Genes associated with rs58909367[chr17:2752881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More