EnhancerDB
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  3. rs58935196[chr12:125221271]
Enhancers that have rs58935196[chr12:125221271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58935196[chr12:125221271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125220180 125221384 ZNF274 GTRD no Cervix (HeLa-S3) 21582471
chr12 125220675 125221526 ZNF274 GTRD no Bone Marrow (K562) 21582487
chr12 125220727 125221279 ZNF274 GTRD no Cervix (HeLa-S3) 21582488
chr12 125220735 125221388 ZNF274 GTRD no Cervix (HeLa-S3) 21582489
chr12 125220806 125221490 ZNF143 GTRD no Epithelial (MCF-7) 21582490
chr12 125220863 125221392 ZNF143 GTRD no Epithelial (MCF-7) 21582491
chr12 125220971 125221413 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582493
chr12 125220994 125221358 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582494
chr12 125221000 125221409 ZNF274 GTRD no Liver (HepG2) 21582495
chr12 125221257 125221277 RREB1 JASPAR yes 124415534
chr12 125221264 125221280 GLIS1 JASPAR yes 124415535
Genes associated with rs58935196[chr12:125221271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More