EnhancerDB
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  3. rs58935650[chr17:48962717]
Enhancers that have rs58935650[chr17:48962717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs58935650[chr17:48962717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48960667 48962919 ZNF274 GTRD no Liver (HepG2) 21770146
chr17 48961931 48963720 TCF7L2 GTRD no Colon (HCT116) 21770234
chr17 48962709 48962723 ATF7 JASPAR yes 54728925
chr17 48962709 48962723 BATF3 JASPAR yes 54728926
chr17 48962709 48962723 CREB3 JASPAR yes 54728927
chr17 48962710 48962722 JDP2 JASPAR yes 54728928
chr17 48962712 48962717 ATF1 TRANSFAC yes 54728929
chr17 48962712 48962720 CREB1 JASPAR yes 54728930
chr17 48962714 48962719 ATF1 TRANSFAC yes 54728931
Genes associated with rs58935650[chr17:48962717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More