EnhancerDB
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  3. rs58978869[chr3:149339550]
Enhancers that have rs58978869[chr3:149339550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 149339543 149339560 vista42745
VISTA
Transcript factors that have rs58978869[chr3:149339550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149339545 149339558 ZBTB18 JASPAR yes 6515447
chr3 149339545 149339558 ZBTB18 JASPAR yes 71065697
chr3 149339547 149339556 SNAI2 JASPAR yes 6515448
chr3 149339547 149339556 SNAI2 JASPAR yes 71065698
chr3 149339547 149339557 FIGLA JASPAR yes 6515449
chr3 149339547 149339557 ID4 JASPAR yes 6515450
chr3 149339547 149339557 MSC JASPAR yes 6515451
chr3 149339547 149339557 TCF3 JASPAR yes 6515452
chr3 149339547 149339557 TCF4 JASPAR yes 6515453
chr3 149339547 149339557 FIGLA JASPAR yes 71065699
chr3 149339547 149339557 ID4 JASPAR yes 71065700
chr3 149339547 149339557 MSC JASPAR yes 71065701
chr3 149339547 149339557 TCF3 JASPAR yes 71065702
chr3 149339547 149339557 TCF4 JASPAR yes 71065703
Genes associated with rs58978869[chr3:149339550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More