EnhancerDB
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  3. rs59258525[chr1:234630036]
Enhancers that have rs59258525[chr1:234630036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59258525[chr1:234630036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234629721 234630241 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393309
chr1 234629730 234630246 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393310
chr1 234629730 234630250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393311
chr1 234629801 234630105 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393312
chr1 234629802 234630066 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393313
chr1 234629805 234630395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393314
chr1 234629819 234630149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393315
chr1 234629827 234630102 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393316
chr1 234629832 234630142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393317
chr1 234629845 234630088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393318
chr1 234629857 234630061 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393319
chr1 234629874 234630164 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393320
chr1 234629879 234630059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393321
chr1 234629927 234630041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393322
Genes associated with rs59258525[chr1:234630036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More