EnhancerDB
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  3. rs59336519[chr12:52517095]
Enhancers that have rs59336519[chr12:52517095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs59336519[chr12:52517095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52516118 52517536 ZNF143 GTRD no Epithelial (MCF-7) 21546215
chr12 52516151 52517509 ZNF143 GTRD no Epithelial (MCF-7) 21546217
chr12 52516192 52517561 ZNF143 GTRD no Epithelial (MCF-7) 21546220
chr12 52516750 52517422 ZNF143 GTRD no Epithelial (MCF-7) 21546227
chr12 52517087 52517108 IRF1 JASPAR yes 120919160
chr12 52517093 52517114 IRF1 JASPAR yes 120919161
chr12 52517095 52517110 PRDM1 JASPAR yes 120919162
chr12 52517095 52517110 STAT2 JASPAR yes 120919163
Genes associated with rs59336519[chr12:52517095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More