EnhancerDB
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  3. rs59414542[chr17:49006958]
Enhancers that have rs59414542[chr17:49006958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59414542[chr17:49006958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49006179 49007428 ZNF274 GTRD no Bone Marrow (K562) 21771109
chr17 49006946 49006967 IRF1 JASPAR yes 54735365
chr17 49006949 49006963 SPI1 JASPAR yes 54735366
chr17 49006952 49006973 IRF1 JASPAR yes 54735367
chr17 49006954 49006975 IRF1 JASPAR yes 54735368
chr17 49006955 49006976 IRF1 JASPAR yes 54735369
chr17 49006957 49006972 FOXP1 JASPAR yes 54735370
chr17 49006958 49006973 FOXP1 JASPAR yes 54735371
Genes associated with rs59414542[chr17:49006958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More