EnhancerDB
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  3. rs59460888[chr2:240171961]
Enhancers that have rs59460888[chr2:240171961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59460888[chr2:240171961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240171958 240171973 TFAP2C JASPAR yes 82221129
chr2 240171960 240171973 TFAP2A JASPAR yes 82221130
chr2 240171960 240171973 TFAP2B JASPAR yes 82221131
chr2 240171960 240171973 TFAP2C JASPAR yes 82221132
chr2 240171961 240171972 EBF1 JASPAR yes 82221133
Genes associated with rs59460888[chr2:240171961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More