EnhancerDB
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  3. rs59513736[chr17:48983261]
Enhancers that have rs59513736[chr17:48983261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59513736[chr17:48983261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48982747 48983311 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770629
chr17 48982791 48983307 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770634
chr17 48982808 48983278 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21770636
chr17 48982817 48983387 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21770637
chr17 48983256 48983273 RARA JASPAR yes 54731893
chr17 48983261 48983271 HOXA13 JASPAR yes 54731894
chr17 48983261 48983271 HOXB13 JASPAR yes 54731895
chr17 48983261 48983271 HOXC10 JASPAR yes 54731896
chr17 48983261 48983271 HOXD13 JASPAR yes 54731897
chr17 48983261 48983272 HOXA10 JASPAR yes 54731898
chr17 48983261 48983272 HOXC12 JASPAR yes 54731899
Genes associated with rs59513736[chr17:48983261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More