EnhancerDB
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  3. rs59542675[chr17:43253143]
Enhancers that have rs59542675[chr17:43253143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs59542675[chr17:43253143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43253137 43253150 HNF1B JASPAR yes 54433464
chr17 43253143 43253147 YY1 TRANSFAC yes 54433465
Genes associated with rs59542675[chr17:43253143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More