EnhancerDB
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  3. rs59629536[chr17:41486796]
Enhancers that have rs59629536[chr17:41486796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59629536[chr17:41486796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41486491 41487487 ZNF274 GTRD no Cervix (HeLa-S3) 21760120
chr17 41486492 41487418 ZNF274 GTRD no Liver (HepG2) 21760121
chr17 41486578 41487396 ZNF274 GTRD no Liver (HepG2) 21760122
chr17 41486631 41487324 ZNF274 GTRD no Liver (HepG2) 21760123
chr17 41486718 41487319 ZNF274 GTRD no Liver (HepG2) 21760124
chr17 41486729 41487287 ZNF274 GTRD no Liver (HepG2) 21760125
chr17 41486742 41487201 ZNF274 GTRD no Cervix (HeLa-S3) 21760126
chr17 41486752 41487223 ZNF274 GTRD no Liver (HepG2) 21760127
chr17 41486773 41487240 ZNF274 GTRD no Liver (HepG2) 21760128
chr17 41486790 41486805 FOXP1 JASPAR yes 54343288
chr17 41486791 41486806 FOXP1 JASPAR yes 54343289
chr17 41486792 41486807 FOXP1 JASPAR yes 54343290
chr17 41486792 41486813 IRF1 JASPAR yes 54343291
chr17 41486793 41486808 FOXP1 JASPAR yes 54343292
chr17 41486794 41486809 FOXP1 JASPAR yes 54343293
chr17 41486794 41486815 IRF1 JASPAR yes 54343294
chr17 41486795 41486810 FOXP1 JASPAR yes 54343295
chr17 41486796 41486817 IRF1 JASPAR yes 54343296
Genes associated with rs59629536[chr17:41486796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More