EnhancerDB
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  3. rs59838348[chr1:117412159]
Enhancers that have rs59838348[chr1:117412159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs59838348[chr1:117412159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117412151 117412166 MEF2C JASPAR yes 31846383
chr1 117412152 117412167 MEF2A JASPAR yes 31846384
chr1 117412153 117412165 MEF2A JASPAR yes 31846385
chr1 117412153 117412165 MEF2B JASPAR yes 31846386
chr1 117412153 117412165 MEF2D JASPAR yes 31846387
chr1 117412159 117412174 MEF2C JASPAR yes 31846388
Genes associated with rs59838348[chr1:117412159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More