EnhancerDB
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  3. rs59885725[chr17:80482493]
Enhancers that have rs59885725[chr17:80482493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59885725[chr17:80482493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80482481 80482498 BCL6B JASPAR yes 56369951
chr17 80482482 80482497 STAT1 JASPAR yes 56369952
chr17 80482484 80482495 STAT1 JASPAR yes 56369953
chr17 80482484 80482495 STAT3 JASPAR yes 56369954
chr17 80482485 80482496 STAT1 JASPAR yes 56369955
chr17 80482485 80482496 STAT3 JASPAR yes 56369956
chr17 80482486 80482501 FOXP1 JASPAR yes 56369957
chr17 80482489 80482496 NFATC2 JASPAR yes 56369958
chr17 80482489 80482500 FOXP2 JASPAR yes 56369959
chr17 80482490 80482498 FOXO3 JASPAR yes 56369960
chr17 80482491 80482500 SRY JASPAR yes 56369961
Genes associated with rs59885725[chr17:80482493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More