EnhancerDB
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  3. rs59990180[chr6:112320673]
Enhancers that have rs59990180[chr6:112320673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs59990180[chr6:112320673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112320664 112320676 TAL1 JASPAR yes 104396323
chr6 112320665 112320675 MAX JASPAR yes 104396324
chr6 112320666 112320676 CLOCK JASPAR yes 104396325
chr6 112320666 112320676 MYF6 JASPAR yes 104396326
chr6 112320666 112320676 NEUROG2 JASPAR yes 104396327
Genes associated with rs59990180[chr6:112320673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More