EnhancerDB
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  3. rs60002355[chr2:232543397]
Enhancers that have rs60002355[chr2:232543397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60002355[chr2:232543397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232543397 232543411 GLIS2 JASPAR yes 81735545
chr2 232543397 232543411 GLIS3 JASPAR yes 81735546
chr2 232543397 232543411 ZIC1 JASPAR yes 81735547
chr2 232543397 232543412 ZIC3 JASPAR yes 81735548
chr2 232543397 232543412 ZIC4 JASPAR yes 81735549
Genes associated with rs60002355[chr2:232543397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More