EnhancerDB
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  3. rs600136[chr1:229355392]
Enhancers that have rs600136[chr1:229355392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs600136[chr1:229355392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229355385 229355396 CDX2 JASPAR yes 35975904
chr1 229355385 229355399 ONECUT2 JASPAR yes 35975905
chr1 229355385 229355399 ONECUT3 JASPAR yes 35975906
chr1 229355386 229355402 SOX8 JASPAR yes 35975907
Genes associated with rs600136[chr1:229355392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More