EnhancerDB
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  3. rs60028839[chr6:30767301]
Enhancers that have rs60028839[chr6:30767301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60028839[chr6:30767301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30767285 30767306 IRF1 JASPAR yes 101051663
chr6 30767287 30767302 STAT2 JASPAR yes 101051664
chr6 30767288 30767302 STAT1 JASPAR yes 101051665
chr6 30767289 30767301 IRF1 JASPAR yes 101051666
chr6 30767289 30767304 IRF9 JASPAR yes 101051667
chr6 30767291 30767312 IRF1 JASPAR yes 101051668
chr6 30767293 30767308 STAT2 JASPAR yes 101051669
chr6 30767294 30767308 SPI1 JASPAR yes 101051670
chr6 30767294 30767308 STAT1 JASPAR yes 101051671
chr6 30767295 30767316 IRF1 JASPAR yes 101051672
chr6 30767297 30767302 ETS2 TRANSFAC yes 101051673
Genes associated with rs60028839[chr6:30767301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More