EnhancerDB
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  3. rs60052942[chr1:19769718]
Enhancers that have rs60052942[chr1:19769718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60052942[chr1:19769718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19769714 19769729 FOXP1 JASPAR yes 27190897
chr1 19769715 19769730 FOXP1 JASPAR yes 27190898
chr1 19769716 19769731 FOXP1 JASPAR yes 27190899
Genes associated with rs60052942[chr1:19769718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More