EnhancerDB
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  3. rs60214478[chr5:172262741]
Enhancers that have rs60214478[chr5:172262741]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172262088 172262814 vista50181
VISTA
Transcript factors that have rs60214478[chr5:172262741]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172262726 172262741 HNF4A JASPAR yes 67832486
chr5 172262726 172262741 HNF4A JASPAR yes 70763981
chr5 172262735 172262753 NFYA JASPAR yes 67832487
chr5 172262735 172262753 NFYA JASPAR yes 70763982
chr5 172262738 172262754 NFYA JASPAR yes 67832488
chr5 172262738 172262754 NFYA JASPAR yes 70763983
chr5 172262740 172262752 PBX1 JASPAR yes 67832489
chr5 172262740 172262752 PBX1 JASPAR yes 70763984
chr5 172262741 172262756 NFYB JASPAR yes 67832490
chr5 172262741 172262756 NFYB JASPAR yes 70763985
Genes associated with rs60214478[chr5:172262741], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More