EnhancerDB
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  3. rs60287622[chr3:149304437]
Enhancers that have rs60287622[chr3:149304437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149284825 149341275 enh21022
Brain (SK-N-MC) Liver Colon (HCT116) Uterus Kidney Stomach Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60287622[chr3:149304437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149304428 149304438 HOXC10 JASPAR yes 6509628
chr3 149304428 149304438 HOXD13 JASPAR yes 6509629
chr3 149304428 149304439 HOXC13 JASPAR yes 6509630
chr3 149304429 149304439 GSX1 JASPAR yes 6509631
chr3 149304429 149304439 GSX2 JASPAR yes 6509632
chr3 149304430 149304438 NKX6-1 JASPAR yes 6509633
chr3 149304430 149304438 NKX6-2 JASPAR yes 6509634
chr3 149304430 149304440 POU6F2 JASPAR yes 6509635
chr3 149304433 149304443 SREBF1 JASPAR yes 6509636
chr3 149304433 149304443 SREBF2 JASPAR yes 6509637
Genes associated with rs60287622[chr3:149304437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More