EnhancerDB
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  3. rs60335230[chr5:77808965]
Enhancers that have rs60335230[chr5:77808965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs60335230[chr5:77808965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77808960 77808970 EMX1 JASPAR yes 63594896
chr5 77808960 77808970 HOXB3 JASPAR yes 63594897
chr5 77808960 77808970 MEOX2 JASPAR yes 63594898
chr5 77808961 77808969 NKX6-1 JASPAR yes 63594899
Genes associated with rs60335230[chr5:77808965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More